Index

A

abort() (olfactometer.valve_driver.ValveDriver method), [1] add_molecule_id() (olfactometer.smell_engine.SmellEngine method), [1] add_valve() (olfactometer.equipment.Olfactometer method) allValues() (olfactometer.ui.UI method) ao_channel (olfactometer.equipment.MFC attribute) (olfactometer.my_equipment.MyHighMFC attribute) (olfactometer.my_equipment.MyLowMFC attribute) (olfactometer.my_equipment.MyMediumMFC attribute)

append() (olfactometer.smell_engine.SmellEngine method), [1] append_target_concentration() (olfactometer.data_container.DataContainer method) append_value() (olfactometer.contour_plot_generator.plotterDim method) (olfactometer.data_container.DataContainer method) area() (olfactometer.equipment.Jar property) (olfactometer.equipment.Opening property) automation_set_mfc_setpoints() (olfactometer.smell_engine.SmellEngine method), [1]

B

bernoulli() (in module olfactometer.physics)

C

calc_conc() (olfactometer.smell_controller.SmellController class method), [1] calc_conc_jit() (in module olfactometer.equipment) (in module olfactometer.smell_controller), [1] calculate_target_achieved_error() (olfactometer.smell_engine.SmellEngine method), [1] cas (olfactometer.odorants.Molecule attribute) chemical_order (olfactometer.odorants.Compound attribute) ChemicalOrder (class in olfactometer.odorants) cid_to_molecule() (olfactometer.equipment.Olfactometer method) cids (olfactometer.valve_driver.ValveDriver attribute), [1] clean_valve_mfc_values() (olfactometer.smell_controller.SmellController method), [1] close_smell_engine() (olfactometer.smell_engine.SmellEngine method), [1]

close_tasks() (olfactometer.valve_driver.ValveDriver method), [1] Compound (class in olfactometer.odorants) compounds() (olfactometer.odorants.Solution property) concentration_mixtures (olfactometer.smell_engine_communicator.SmellEngineCommunicator attribute) concentrations (olfactometer.smell_engine.SmellEngine attribute), [1] connect_jars() (olfactometer.equipment.Olfactometer method) connections (olfactometer.equipment.Opening attribute) constants_text() (olfactometer.contour_plot_generator.plotterDim method) contents() (olfactometer.equipment.Jar property) convert_concentration_format() (olfactometer.valve_driver.ValveDriver method), [1] create_json() (olfactometer.data_container.DataContainer method) curr_flow_rate_uncertainty() (olfactometer.my_equipment.MyMFC property)

D

DataContainer (class in olfactometer.data_container) date_arrived (olfactometer.odorants.Compound attribute) date_opened (olfactometer.odorants.Compound attribute) debug_mode (olfactometer.smell_engine.SmellEngine attribute), [1] (olfactometer.smell_engine_communicator.SmellEngineCommunicator attribute) density() (olfactometer.equipment.Jar property) (olfactometer.equipment.Opening property) determine_clean_air_pair() (olfactometer.valve_driver.ValveDriver method) diameter (olfactometer.equipment.Jar attribute) (olfactometer.equipment.Opening attribute) (olfactometer.my_equipment.MyJar attribute)

digValueInit() (olfactometer.plotter.plotter method) digValueUpdate() (olfactometer.plotter.plotter method) dilutions() (olfactometer.odorants.Solution property) draw() (olfactometer.plotter.plotter method) dutyCyclesUI() (olfactometer.ui.UI method) dutyCyclesValidation() (olfactometer.ui.UI method) dutyCyclesValues() (olfactometer.ui.UI method)

F

fill() (olfactometer.equipment.Jar method) fill_details() (olfactometer.odorants.Molecule method), [1] find_odorant_id_by_index() (olfactometer.equipment.Olfactometer method) (olfactometer.smell_controller.SmellController method), [1] fix_concs() (in module olfactometer.odorants)

flow_rate() (olfactometer.equipment.MFC property) flow_rate_to_voltage() (olfactometer.equipment.MFC method) flow_rate_uncertainty() (olfactometer.equipment.MFC property) flow_units (olfactometer.equipment.Olfactometer attribute) format_bits() (olfactometer.valve_driver.ValveDriver method), [1]

G

generate_analog_frame_writes() (olfactometer.valve_driver.ValveDriver method), [1] generate_contour_points() (olfactometer.contour_plot_generator.plotterDim method) generate_digital_frame_writes() (olfactometer.valve_driver.ValveDriver method), [1] get_addtional_om_props() (olfactometer.odorants.Molecule method), [1] get_cid_by_name() (olfactometer.odorants.Molecule method), [1] get_cid_from_api() (olfactometer.odorants.Molecule method), [1] get_density() (olfactometer.odorants.Molecule method), [1] get_desired_concentrations() (olfactometer.smell_engine.SmellEngine method), [1] get_index() (olfactometer.odor_table_look_up.OdorTableLookup method) get_max_flow_rates() (olfactometer.smell_controller.SmellController method), [1]

get_mfc_setpoints() (olfactometer.smell_engine.SmellEngine method), [1] get_molecular_ids() (olfactometer.smell_engine.SmellEngine method), [1] get_name_from_api() (olfactometer.odorants.Molecule method) get_unique_tuples() (in module olfactometer.equipment) get_valve_duty_cycles() (olfactometer.smell_engine.SmellEngine method), [1] get_vapor_concs_dense() (olfactometer.smell_controller.SmellController method), [1] get_vapor_pressure() (olfactometer.odorants.Molecule method), [1] getMaxConcentrations() (olfactometer.ui.UI method) graph_contour_points() (olfactometer.contour_plot_generator.plotterDim method) graphPair() (olfactometer.contour_plot_generator.plotterDim method)

H

height (olfactometer.equipment.Jar attribute) (olfactometer.my_equipment.MyJar attribute)

host (olfactometer.equipment.Olfactometer attribute) (olfactometer.equipment.Opening attribute) host_class_names() (in module olfactometer.equipment)

I

id (olfactometer.smell_engine.SmellEngine attribute), [1] ids (olfactometer.smell_engine.SmellEngine attribute), [1], [2], [3], [4], [5], [6], [7], [8], [9] init_analog_in_task() (olfactometer.valve_driver.ValveDriver method), [1] init_analog_task() (olfactometer.valve_driver.ValveDriver method), [1] init_digital_task() (olfactometer.valve_driver.ValveDriver method), [1] init_main_loop() (olfactometer.smell_engine_communicator.SmellEngineCommunicator method)

initialize() (olfactometer.valve_driver.ValveDriver method), [1] initialize_equipment() (olfactometer.smell_engine.SmellEngine method), [1] initialize_olfactometer() (olfactometer.smell_engine.SmellEngine method), [1] initialize_smell_engine_system() (olfactometer.smell_engine.SmellEngine method), [1] is_solvent (olfactometer.odorants.Compound attribute) issue_odorants() (olfactometer.valve_driver.ValveDriver method), [1] iupac (olfactometer.odorants.Molecule attribute)

J

Jar (class in olfactometer.equipment)

K

kdtree_lookup() (olfactometer.smell_controller.SmellController method), [1]

known_impurities (olfactometer.odorants.ChemicalOrder attribute)

L

label (olfactometer.equipment.Opening attribute) (olfactometer.equipment.Pneumatic attribute) liquid_volume (olfactometer.equipment.Jar attribute)

lls_olfactometer_scheduler() (olfactometer.smell_controller.SmellController method), [1] load_concentrations() (olfactometer.smell_engine_communicator.SmellEngineCommunicator method) loaded_molecules() (olfactometer.equipment.Olfactometer property)

M

mackay() (in module olfactometer.physics) main() (in module olfactometer.plotter) (in module olfactometer.smell_engine_communicator) main_thread_loop() (olfactometer.smell_engine_communicator.SmellEngineCommunicator method) mass_flow_rate() (olfactometer.equipment.Opening property) max_evaporation_rates() (olfactometer.equipment.Jar property) max_flow_rate (olfactometer.equipment.MFC attribute) (olfactometer.my_equipment.MyHighMFC attribute) (olfactometer.my_equipment.MyLowMFC attribute) (olfactometer.my_equipment.MyMediumMFC attribute) max_outflow_rate() (olfactometer.smell_controller.SmellController property), [1] max_vapor_flow_rates() (olfactometer.equipment.Jar property) max_volume() (olfactometer.equipment.Jar property) MFC (class in olfactometer.equipment) mfc_flat_list() (olfactometer.equipment.Olfactometer method) mfc_flow_rates_to_voltages() (olfactometer.smell_controller.SmellController method), [1] mfcLineInit() (olfactometer.plotter.plotter method) mfcLineUpdate() (olfactometer.plotter.plotter method) mfcs (olfactometer.equipment.Olfactometer attribute) mfcUI() (olfactometer.ui.UI method) mfcValues() (olfactometer.ui.UI method) mixture (olfactometer.equipment.Jar attribute) model_name (olfactometer.my_equipment.MyHighMFC attribute) (olfactometer.my_equipment.MyLowMFC attribute) (olfactometer.my_equipment.MyMediumMFC attribute) module olfactometer olfactometer.contour_plot_generator olfactometer.data_container olfactometer.equipment olfactometer.my_equipment olfactometer.odor_table_look_up olfactometer.odorants, [1] olfactometer.physics olfactometer.PID_reader olfactometer.plotter olfactometer.smell_controller, [1] olfactometer.smell_engine, [1] olfactometer.smell_engine_communicator olfactometer.ui olfactometer.valve_driver, [1]

molar_evaporation_rate() (olfactometer.odorants.Molecule property) molar_evaporation_rates() (olfactometer.odorants.Solution property) molarities() (olfactometer.equipment.Jar property) (olfactometer.odorants.Solution property) molarity() (olfactometer.odorants.Molecule property) mole_fraction() (olfactometer.odorants.Solution method) mole_fractions() (olfactometer.odorants.Solution property) Molecule (class in olfactometer.odorants), [1] molecule (olfactometer.odorants.ChemicalOrder attribute) molecules() (olfactometer.odorants.Solution property) MyHighMFC (class in olfactometer.my_equipment) MyJar (class in olfactometer.my_equipment) MyLowMFC (class in olfactometer.my_equipment) MyMediumMFC (class in olfactometer.my_equipment) MyMFC (class in olfactometer.my_equipment) MyOlfactometer (class in olfactometer.my_equipment) MyValve (class in olfactometer.my_equipment)

N

name (olfactometer.odorants.Vendor attribute)

numberPrefix() (olfactometer.ui.UI method) numberPrefixR() (olfactometer.ui.UI method)

O

occupancyTimeUI() (olfactometer.ui.UI method) occupancyTimeValidation() (olfactometer.ui.UI method) occupancyTimeValues() (olfactometer.ui.UI method) odLineInit() (olfactometer.plotter.plotter method) odLineUpdate() (olfactometer.plotter.plotter method) odorConcentrationSetMaxself() (olfactometer.ui.UI method) odorConcentrationSetMinself() (olfactometer.ui.UI method) odorConcentrationSetStepself() (olfactometer.ui.UI method) odorConcentrationUI() (olfactometer.ui.UI method) odorConcentrationValues() (olfactometer.ui.UI method) odorSelectorsValues() (olfactometer.ui.UI method) odorSelectorUI() (olfactometer.ui.UI method) OdorTableLookup (class in olfactometer.odor_table_look_up) olf (olfactometer.valve_driver.ValveDriver attribute), [1] olfactometer module Olfactometer (class in olfactometer.equipment) olfactometer.contour_plot_generator module olfactometer.data_container module olfactometer.equipment module olfactometer.my_equipment module olfactometer.odor_table_look_up module

olfactometer.odorants module, [1] olfactometer.physics module olfactometer.PID_reader module olfactometer.plotter module olfactometer.smell_controller module, [1] olfactometer.smell_engine module, [1] olfactometer.smell_engine_communicator module olfactometer.ui module olfactometer.valve_driver module, [1] olfactometer_schedule() (olfactometer.smell_controller.SmellController property), [1] om_dilutions() (olfactometer.smell_engine.SmellEngine property), [1] om_ids() (olfactometer.smell_engine.SmellEngine property), [1] Opening (class in olfactometer.equipment) optimization_report() (olfactometer.smell_controller.SmellController method), [1] optimize() (olfactometer.smell_controller.SmellController method), [1] outflow_fractions() (olfactometer.smell_controller.SmellController property), [1] outflow_rates() (olfactometer.smell_controller.SmellController property), [1]

P

part_id (olfactometer.odorants.ChemicalOrder attribute) partial_pressure() (olfactometer.odorants.Solution method) partial_pressures() (olfactometer.odorants.Solution property) PID_Tester (class in olfactometer.PID_reader) plotter (class in olfactometer.plotter) plotterDim (class in olfactometer.contour_plot_generator) Pneumatic (class in olfactometer.equipment)

position (olfactometer.equipment.Pneumatic attribute) positions (olfactometer.equipment.Pneumatic attribute) pressure (olfactometer.equipment.Opening attribute) print_data_binary() (olfactometer.smell_engine.SmellEngine method), [1] (olfactometer.valve_driver.ValveDriver method), [1] print_valve_durations() (olfactometer.valve_driver.ValveDriver method) pubchem_parsing() (olfactometer.odorants.Molecule method), [1] purity (olfactometer.odorants.ChemicalOrder attribute)

Q

query() (olfactometer.odor_table_look_up.OdorTableLookup method)

R

random() (in module olfactometer.PID_reader) read_concentration_values() (olfactometer.PID_reader.PID_Tester method) receive_pub_chemIDs() (olfactometer.smell_engine_communicator.SmellEngineCommunicator method) receive_quantity_odorants() (olfactometer.smell_engine_communicator.SmellEngineCommunicator method) recieve_dilutions() (olfactometer.smell_engine_communicator.SmellEngineCommunicator method) RepresentsFloat() (olfactometer.ui.UI method)

RepresentsInt() (olfactometer.ui.UI method) residuals() (olfactometer.contour_plot_generator.plotterDim method) (olfactometer.smell_controller.SmellController class method), [1] routes (olfactometer.equipment.Pneumatic attribute) row_graph_contour_points() (olfactometer.contour_plot_generator.plotterDim method) rowPlot() (olfactometer.contour_plot_generator.plotterDim method)

S

set_data() (olfactometer.contour_plot_generator.plotterDim method) set_desired_concentrations() (olfactometer.smell_engine.SmellEngine method), [1] set_mfc_setpoints() (olfactometer.smell_engine.SmellEngine method), [1] (olfactometer.valve_driver.ValveDriver method), [1] set_odorant_molecule_dilutions() (olfactometer.smell_engine.SmellEngine method), [1] set_odorant_molecule_ids() (olfactometer.smell_engine.SmellEngine method), [1] set_olfactometer_target_outflow() (olfactometer.smell_engine.SmellEngine method), [1] set_starting_concentration() (olfactometer.smell_engine.SmellEngine method), [1] set_task_clock() (olfactometer.valve_driver.ValveDriver method), [1] set_valve_duty_cycles() (olfactometer.smell_engine.SmellEngine method), [1]

set_valve_states() (olfactometer.valve_driver.ValveDriver method), [1] sliderLog() (olfactometer.ui.UI method) sliderLogR() (olfactometer.ui.UI method) SmellController (class in olfactometer.smell_controller), [1] SmellEngine (class in olfactometer.smell_engine), [1] SmellEngineCommunicator (class in olfactometer.smell_engine_communicator) Solution (class in olfactometer.odorants) specify_analog_frame_writes() (olfactometer.valve_driver.ValveDriver method), [1] specify_digital_frame_writes() (olfactometer.valve_driver.ValveDriver method), [1] stock (olfactometer.odorants.Compound attribute) synonyms (olfactometer.odorants.Molecule attribute)

T

target_outflow() (olfactometer.smell_controller.SmellController property), [1] target_outflow_concs() (olfactometer.smell_controller.SmellController property), [1] target_outflow_rate() (olfactometer.smell_controller.SmellController property), [1] timer_pause() (olfactometer.PID_reader.PID_Tester method) (olfactometer.valve_driver.ValveDriver method), [1] timer_resume() (olfactometer.PID_reader.PID_Tester method) (olfactometer.valve_driver.ValveDriver method), [1] timer_run() (olfactometer.PID_reader.PID_Tester method) (olfactometer.valve_driver.ValveDriver method), [1]

timer_setup() (olfactometer.PID_reader.PID_Tester method) (olfactometer.valve_driver.ValveDriver method), [1] timer_start() (olfactometer.PID_reader.PID_Tester method) (olfactometer.valve_driver.ValveDriver method), [1] timer_stop() (olfactometer.PID_reader.PID_Tester method) (olfactometer.valve_driver.ValveDriver method), [1] timeSeriesUpdate() (olfactometer.ui.UI method) total_pressure() (olfactometer.odorants.Solution property)

U

UI (class in olfactometer.ui) update_target() (olfactometer.smell_controller.SmellController method), [1] update_target_from_logical() (olfactometer.smell_controller.SmellController method), [1]

updateSliderValue() (olfactometer.ui.UI method) url (olfactometer.odorants.Vendor attribute) url_to_json() (olfactometer.odorants.Molecule method)

V

ValveDriver (class in olfactometer.valve_driver), [1] vapor_concentration() (olfactometer.odorants.Solution method) vapor_concentrations() (olfactometer.odorants.Solution property) vapor_concs() (olfactometer.equipment.Jar property) vapor_fraction() (olfactometer.odorants.Solution method) vapor_fractions() (olfactometer.equipment.Jar property) (olfactometer.odorants.Solution property) vapor_molecules() (olfactometer.equipment.Jar property) velocity (olfactometer.equipment.Opening attribute)

Vendor (class in olfactometer.odorants) vendor (olfactometer.equipment.Jar attribute) (olfactometer.odorants.ChemicalOrder attribute) venturi() (in module olfactometer.physics) voltage (olfactometer.equipment.MFC attribute) voltage_max (olfactometer.equipment.MFC attribute) voltage_min (olfactometer.equipment.MFC attribute) voltage_range() (olfactometer.equipment.MFC property) volume_flow_rate() (olfactometer.equipment.Opening property)

W

write_output() (olfactometer.valve_driver.ValveDriver method), [1]

write_output_digital() (olfactometer.valve_driver.ValveDriver method) write_zeroes() (olfactometer.valve_driver.ValveDriver method), [1]